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図書
Henry Horng-Shing Lu, Bernhard Schölkopf, Martin T. Wells, Hongyu Zhao, editorsSpringer[2022]<RA71-D111>
国立国会図書館全国の図書館
  • 要約等...he three parts of the book cover......al methods for single-cell analysis, network analysis, and systems b......deling and the analysis of massive data sets generated by modern biot...
  • 内容細目Preface Part I Single-cell Analysis Computational ......al methods for single-cell RNA sequencing data Pre-processing......clustering for single-cell RNA-seq data Integrative analyses of single-cell multi-omics data: a review from......ification from single-cell RNA-sequencing data Model-based clustering of single-cell omics data Deep learning ......gle cell omics data Part II Network Analysis Probabilistic ......es Integration of Boolean and Ba......ance Mediation Analysis in Microbiome ...... Type Specific Analysis for Gene Expre......nt development of computational ......s in the field of epitranscripto......ics Estimation of Tumor Immune Signatures from ...
  • 関連情報Springer handbooks of computational statistics
図書
edited by Valentina ProserpioHumana Press[2019]<RA111-D44>
国立国会図書館
  • 要約等...y at the level of individual cel......ts detailing a single-cell lab, single ce...... topics, lists of the necessary materials and r...
  • 内容細目.... Setting up a single-cell genomic labora......ssociation for single-cell RNA-seq Single...... trancriptomic analysis. Full-length single-cell RNA sequencing......seq2 CEL-Seq2: single-cell RNA sequencing...... amplification Single-cell RNA-seq by mul......d quantitative single-cell RNA-seq (MATQ-seq) Single-Cell RNA sequencing......q Chromium 10× single-cell 3′ mRNA sequencing of tumor-infiltra......ively parallel single-cell RNA sequencing Single-cell tagged reverse......ion (STRT-seq) Single-cell RNA-sequencing of peripheral blo......igh-throughput single-cell real-time quantitative PCR analysis Single-cell dosing and mRNA s...
  • 件名Cytology--Laboratory manuals Cytological Techniques Single-Cell Analysis--methods Cytology
図書
edited by Kazuharu ArakawaHumana Press[2023]<RA111-D70>
国立国会図書館
  • 要約等...me sequencing, analysis of repetitive reg...... transcriptome analysis. Written in the format of the highly successful Methods...
  • 内容細目The current state of nanopore seque......enome assembly of short and long......enome assembly of Japanese Black......attle as model of an economicall......omes Detection of DNA modificati......MDA The method of eliminating th......titive regions Analysis of tandem repeat ...... and detection of structural var...... 16S rRNA gene analysis using long-rea......identification of bacteria from ......ore sequencing data analysis of 16S rRNA genes......pidemiological analysis of antimicrobial-......identification of nontuberculous......eria Long-read single-cell sequencing usi......RNA Sequencing of Monosome-and Polysome-bound R...
図書
edited by Ryota Yamagami, Chun Kit KwokAcademic Press2023<RA84-D13>
国立国会図書館全国の図書館
  • 内容細目...wide detection of dihydrouridine......cation 4 D-seq data analysis 4.1 Trimming of adapter sequen.......1 Preparation of RNA samples 2.......sequencing and data analysis 3 Methods 3.1 .......2 Preparation of RNA sample 3.3......sequencing and data analysis 4 Notes Fundin......sequencing and data analysis 3.1 Overview of DAMM-seq 3.3 R......sequencing and data analysis Chapter Four: ...... approach 2.1 Software 3.2 RNA modification analysis in multiple or......ve: Functional analysis of tRNA modificat......g mutational profilingFunctional analysis of tRNA modificat......g mutational profiling 2.1 Preparation of DNA templates 2.2 In vitro RN...
図書
Manoj Kumar Gupta, Lambodar Behera, editorsSpringer[2021]<RB113-D9>
国立国会図書館
  • 要約等...to-date review of classic and ad...... It summarizes databases and tools......e expression profiles, mapping g......ns, annotation of protein and RN......, phylogenetic analysis, and pathway e......c architecture of important trai......n the contexts of rice breeding and genetics. L...
  • 内容細目..._ Introduction of the databases of rice Chapter 4...... domestication of wild rice rela......ght Chapter 6_ Databases and bioin......tics tools for data mining Chapter......9_Phylogenetic Analysis Chapter 10_RNA......way enrichment analysis Chapter 13_Hig......in Interaction Analysis (ChIP-Seq) Cha......in Interaction Analysis Chapter 17_SNP......0_Expression Profiling and Discovery of microRNA Chapt......ing Chapter 25_Single-cell RNA sequencing technologies C...
図書
edited by Frédéric DevauxHumana Press[2022]<RA621-D4>
国立国会図書館全国の図書館
  • 要約等...d phenotypic profiling, and Part......co integration of functional genomics data. Written in th...... topics, lists of the necessary ......evolving field of yeast
  • 内容細目Single-Cell RNA-Sequencing...... Genome-Wide Profiling of Transcription ......d Crosslinking Analysis of cDNAs (CRAC) P......eep Sequencing of Nascent Transc......ect Sequencing of RNA and RNA Mo......Identification of Taxonomically ......RNA Sequencing Data FORK-seq: Single Molecule Profiling of DNA Replication CUT&RUN Profiling of the Budding Ye......s Purification of Ribosome-Nasce......for Ribosome Profiling and Selec......ive Ribosome Profiling Single-St......s Spectrometry of Macromolecular......n and Dynamics of Protein Comple......s Spectrometry of Affinity Purif......ional Scanning of Protein-Protein Interaction S...
図書
edited by Ren ZhangHumana Press[2022]<RA111-D55>
国立国会図書館全国の図書館
  • 要約等This book provides state-of-the-art inform......a wide variety of organisms, i.e...... topics, lists of the necessary materials and r...
  • 内容細目...e Essentiality of Human Pluripot......Identification of Small Molecule......nesis Scanning of Essential Gene......and Generation of a CRISPR Inter......Essential Gene Analysis in the Fungal ......Identification of Essential Gene......onal Mutations of Essential Gene......teria A Method of Transposon Ins...... Serum The Use of Tn-Seq and the FiTnEss Analysis to Define the ......sential Genome of Pseudomonas aeruginosa Analysis of Escherichia co......tification and Analysis of Essential Gene......encing The Use of TnSeq to Ident......ia: Case Study of Bifidobacteriu......as a Prototype of Its Genus The Application of Transposon Insertion Sequenci...
  • 著者標目Zhang, Ren (Of Wayne State University)
記事
枝廣 龍哉, 岡田 随象<Z19-330>生体の科学74(2):2023.3・4p.134-137
国立国会図書館全国の図書館
  • 並列タイトル等(連結)Integrated analysis of single-cell and genetic data
  • 並列タイトル等Integrated analysis of single-cell and genetic data
記事
二階堂 愛<Z19-96>医学のあゆみ276(10)=3343:2021.3.6p.961-966
国立国会図書館全国の図書館
  • 並列タイトル等(連結)Data analysis of single-cell transcriptome
  • 並列タイトル等Data analysis of single-cell transcriptome
デジタル博士論文障害者向け資料あり
Yamamoto, RyosukeKyoto University2022-03-23
インターネットで読める国立国会図書館全国の図書館
  • 件名Embryonic development Inner ear Otic vesicle RNA-Sequencing Single-cell analysis
  • 学位博士(医学) Doctor of Medical Science
記事
枝廣 龍哉, 熊ノ郷 淳, 岡田 随象<Z19-96>医学のあゆみ286(3)=3462:2023.7.15p.213-218
国立国会図書館全国の図書館
  • 並列タイトル等(連結)Elucidating the mechanism of COVID-19 sever...... by integrated analysis of single-cell and host genetics data
  • 並列タイトル等Elucidating the mechanism of COVID-19 sever...... by integrated analysis of single-cell and host genetics data
記事
加藤 護<Z19-96>医学のあゆみ258(4)=3112:2016.7.23p.317-323
国立国会図書館全国の図書館
  • 並列タイトル等(連結)Data analysis of single-cell sequencing
  • 並列タイトル等Data analysis of single-cell sequencing
デジタル記事
2021-06Cell184 13p.3573-3587.e29
全国の図書館
  • 参照...cs and biology of severe COVID-1......ate conversion of supporting cel......hy Engraftment of allogeneic iPS...... primate model of articular cart......ct Multi-omics analysis defines highly......ature subgroup of infant acute l......vivo induction of activin A-prod......he progression of lung cell carc......oma Resolution of the curse of dimensionality in single-cell RNA sequencing data analysis Aire Controls Heterogeneity of Medullary Thym......the Expression of Self-Antigens Inhibition of the renin-angi......ic hypertrophy of renal arteriol......he sensitivity of bacterial single-cell RNA sequencing......ells Intensive single-cell analysis reveals immune-cell ...
デジタル記事
2022-12Life Science Alliance5 12p.e202201591-
インターネットで読める全国の図書館
  • 要約等Single-cell RNA sequencing......ver, scRNA-seq data are high-dimen......opouts. During analysis of scRNA-seq data, such noise en......n as the curse of dimensionality......DE (resolution of the curse of dimensionality......gh-dimensional data with random sa......vant scRNA-seq data with unique mo......se delineation of cell fate tran......identification of rare cells wit...... recovery, and single-cell–level analysis. The RECODE al......arameter-free, data-driven, determ......gh-dimensional data. 1細胞データ解析の精度が飛躍的に向上する前処理法の開発....
  • 参照Induction of fetal meiotic ......r: topological data analysis for high-dimensional data with velocity
  • 参照...itro Induction of Human Germ Cel......ve measurement of single-cell gene expressio......reconstruction of single-cell gene expression data Geometric Representation of High Dimension......ow Sample Size Data Exploring the single-cell RNA-seq analysis landscape with......he scRNA-tools database A single-cell molecular map of mouse gastrula......sis Integrated analysis of multimodal single-cell data Splatter: simulation of single-cell RNA sequencing data Identification of the mammalian ......nomic approach Data denoising with......er learning in single-cell transcriptomic......s Benchmarking single-cell RNA-sequencing protocols for ...
デジタル記事
井元, 佑介, 中村, 友紀, Escolar, G, Emerson, 吉脇, 理雄, 小島, 洋児, 藪田, 幸宏, 加藤, 嘉崇, 山本, 拓也, 平岡, 裕章, 斎藤, 通紀Life Science Alliance, LLC2022-12Life Science Alliance5 12
インターネットで読める全国の図書館
デジタル記事
2020-10-12
全国の図書館
  • 要約等...us measurement of multiple modal...... as multimodal analysis, represents an......g frontier for single-cell genomics and n......ed on multiple data types. Here, w......rest neighbor’ analysis, an unsupervis......lative utility of each data type in each c......an integrative analysis of multiple modal...... to a CITE-seq dataset of hundreds of thousands of human white bl......ngside a panel of 228 antibodies......eference atlas of the circulatin......at integrative analysis substantially ......e the presence of previously unr......apidly map new datasets, and to in......egy to analyze single-cell multimodal datasets, includin...
  • 参照...anscriptomic profiling in osteoimmune diversity
  • 著者標目...el Zagar Paul Hoffman Marlon Stoeckius Efthymia...
デジタル記事
2022-02Nature Biotechnology40 2p.163-166
全国の図書館
  • 参照...anscriptomic profiling in osteoimmune diversity
デジタル記事
2021-12-092021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
インターネットで読める全国の図書館
  • 参照...tional Network of Yeast Genes Ag......transcriptomes of non-cultured a......e assessed via single-cell transcriptome analysis Initiation of Pulmonary Fibr......cs The anatomy of a large-scale ......ic Integration of Single-Cell Transcriptomic Data using Latent D......and Procrustes Analysis Single-cell mRNA quantific......d differential analysis with Census Single-cell Transcriptome Analysis of Mouse Leukocyt......eractions from Single-Cell Data Using Data Diffusion A Sh......yze Expression Data Networks, Crow......arch Inference of a genetic netw......bined approach of cluster analysis and graphical ......ene expression data of bacillus subtilis using di...
デジタル記事
2022-04-01PLOS Computational Biology18 4p.e1010025-
全国の図書館
  • 要約等<jats:p>Advances in single-cell RNA sequencing......hrough cluster analysis. However, cluster analysis is not able to......nuous spectrum of states and und......utoencoder for single-cell non-linear archetypal analysis, to identify G......ative activity of each GEP acros......overdispersion of the raw count data and add an arc...... loss function of scAAnet. We fi......for archetypal analysis across differe......te the ability of scAAnet to ext......able scRNA-seq datasets including ......ncreatic islet dataset, a lung idi......onary fibrosis dataset and a prefrontal cortex dataset.</jats:p>
  • 参照...identification of gene sets in multi-modal single-cell sequencing data using deep ensembles
  • 出版者(掲載誌)Public Library of Science (PLoS)
デジタル記事
2020-12-07Nature Protocols16 1p.1-9
全国の図書館
  • 参照ASURAT: functional annotation-driven unsupervised clustering of single-cell transcriptomes